Files in b-coli/ICITools
R Implementation of Tools for Calculating the Index of Cell Identity
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/build_spec_tools.R
R/compute_ici.R
R/data.R
R/efroni_specific_functions.R
README.md
data/test_birnbaum.rda
data/test_ici.rda
data/test_spec.rda
inst/README.Rmd
inst/README.md
inst/build_data/build_test_data.R
inst/examples/compute_ici_scores_examples.R
inst/examples/compute_spec_table_examples.R
inst/examples/optimize_information_level_examples.R
man/bin_expression_data.Rd
man/compute_ici_for_cell.Rd
man/compute_ici_pval.Rd
man/compute_ici_score_for_cell_type.Rd
man/compute_ici_scores.Rd
man/compute_mean_expr.Rd
man/compute_spec.Rd
man/compute_spec_table.Rd
man/efroni_bin.Rd
man/efroni_get_background_bin.Rd
man/efroni_get_binsizes.Rd
man/efroni_mean.Rd
man/extract_signal_from_info_data.Rd
man/extract_var_from_info_data.Rd
man/find_ici_markers.Rd
man/gather_information_level_data.Rd
man/melted_to_mat.Rd
man/optimize_information_level.Rd
man/test_birnbaum.Rd
man/test_ici.Rd
man/test_spec.Rd
tests/testthat.R
tests/testthat/test-ici_computation.R
tests/testthat/test-spec_score.R
