API for bahlolab/exSTRa
Expanded STR algorithm: detecting expansions in Illumina sequencing data

Global functions
add_alpha_ Source code
analyse_str_score_mw Source code
analyse_str_score_ps Source code
as.exstra_score Man page Source code
copy Source code
copy.exstra_db Source code
copy.exstra_score Man page Source code
copy.exstra_tsum Man page Source code
dim.exstra_score Man page Source code
exstra Man page
exstra_db_new_ Source code
exstra_db_text Source code
exstra_known Man page
exstra_score_ks_tests Source code
exstra_score_new_ Source code
exstra_tsum_new_ Man page Source code
exstra_wgs_pcr_2 Man page
filter_low_scores Source code
filter_sex Source code
generate_T_stat_performance Source code
is.exstra_db Source code
is.exstra_score Source code
is.exstra_tsum Man page Source code
length.exstra_score Man page Source code
loci Man page Source code
loci.exstra_db Source code
loci_min_exp Source code
loci_normal Source code
loci_normal_exp Source code
loci_text_info Source code
loci_text_info.exstra_db Source code
make_quantiles_matrix Source code
midpoint_removal_imputing Source code
munoz_rueda_al1 Source code
munoz_rueda_al1_include Source code
p_values Man page Source code
parReplicate Source code
performance_from_stat_matrix Source code
plot.exstra_score Source code
plot.exstra_tsum Man page Source code
plot_many_str_score Source code
plot_multi Man page Source code
plot_names Source code
plot_names.exstra_score Source code
print.exstra_db Source code
print.exstra_score Source code
print.exstra_tsum Source code
qq.unif Source code
quant_statistic Source code
quant_statistic_sampp Source code
rbind_score Man page Source code
rbind_score_list Man page Source code
read_exstra_db Source code
read_exstra_db_known Source code
read_exstra_db_txt_guesser Source code
read_exstra_db_ucsc Source code
read_exstra_db_xlsx Source code
read_score Source code
remove_below_quant Source code
sample_safe Source code
sd_of_trimmed Source code
sen_spec_all Source code
sensitivity_specificity Source code
simulate_ecdf_quant_statistic Source code
simulation_run Source code
str_score_wmw Source code
str_significant Source code
strs_read_ Source code
suggested_exstra_pipeline Man page Source code
summary_ps Source code
trim_vector Source code
tsum_p_value_summary Man page Source code
tsum_test Man page Source code
variance_of_trimmed Source code
bahlolab/exSTRa documentation built on Nov. 8, 2017, 10:52 a.m.