Files in barefootbiology/heyexr
Import, Transform and Visualize Optical Coherence Tomography Volumes in R
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/RcppExports.R
R/add_undefined.R
R/anonymize_dates.R
R/anonymize_identity.R
R/anonymize_image_id.R
R/anonymize_volume.R
R/construct_bscan.R
R/construct_slo.R
R/delist_singletons.R
R/downsample_mapping.R
R/downsample_vol.R
R/filter_segmentation_xml.R
R/flip_region.R
R/get_bscan.R
R/get_central_segmentation.R
R/get_segmentation.R
R/get_slo.R
R/import_thickness_csv.R
R/list_to_onerow.R
R/package_data.R
R/package_description.R
R/pad_raw.R
R/promote_elements.R
R/read_bscan_header.R
R/read_center_xml.R
R/read_float.R
R/read_float_vector.R
R/read_nifti.R
R/read_oct_files.R
R/read_segmentation_xml.R
R/read_ssoct_files.R
R/read_vol.R
R/read_vol_header.R
R/read_vol_slo.R
R/spline_correction.R
R/strsplit_nth.R
R/theme_nude.R
R/write_bscan_header.R
R/write_vol.R
R/write_vol_header.R
R/write_vol_slo.R
README.md
data-raw/grid_regions.txt
data-raw/grid_sectors_etdrs.tsv
data-raw/layer_definitions.xlsx
data-raw/layer_definitions_iowa_v3-8-0.tsv
data-raw/process-max-float.R
data-raw/process_data-raw.R
data-raw/staurenghi_definitions.xlsx
data-raw/staurenghi_definitions_ira.xlsx
data/grid_regions.rda
data/grid_sectors_etdrs.rda
data/layer_data.rda
data/layer_info.rda
data/max_float.rda
data/vol_fit_spline.RData
deprecated/anonymizing-datetimes.Rmd
deprecated/cbind_rownames.R
deprecated/import_thickness_csv.R
deprecated/layout_plot_2.R
deprecated/layout_plot_4.R
deprecated/read_vol_header_only.R
deprecated/read_vol_noloop.R
deprecated/read_vol_raw.R
deprecated/render_oct_summary.R
deprecated/render_slo.R
heyexr.Rproj
inst/Rscripts/batch_anonymize_vol.R
inst/Rscripts/batch_render_bscans.R
inst/Rscripts/batch_render_bscans_no_xml.R
inst/Rscripts/batch_select_vol.R
inst/Rscripts/render_bscans.R
inst/extdata/TEST_T_566581.vol
inst/extdata/TEST_T_566581_Surfaces_Iowa.xml
inst/extdata/TEST_T_566585.vol
inst/extdata/edtrs_circular_grid_region_diagram.pdf
inst/extdata/edtrs_circular_grid_region_diagram.png
inst/extdata/edtrs_circular_grid_region_diagram.svg
man/add_undefined.Rd
man/anonymize_dates.Rd
man/anonymize_identity.Rd
man/anonymize_image_id.Rd
man/anonymize_volume.Rd
man/construct_bscan.Rd
man/construct_slo.Rd
man/datetime_to_raw.Rd
man/delist_singletons.Rd
man/downsample_mapping.Rd
man/downsample_vol.Rd
man/filter_segmentation_xml.Rd
man/flip_region.Rd
man/get_bscan.Rd
man/get_central_segmentation.Rd
man/get_segmentation.Rd
man/get_slo.Rd
man/grid_regions.Rd
man/heyexr.Rd
man/import_thickness_csv.Rd
man/layer_info.Rd
man/list_to_onerow.Rd
man/max_float.Rd
man/pad_raw.Rd
man/promote_elements.Rd
man/raw_to_datetime.Rd
man/read_bscan_header.Rd
man/read_center_xml.Rd
man/read_float.Rd
man/read_float_vector.Rd
man/read_nifti.Rd
man/read_oct_files.Rd
man/read_segmentation_xml.Rd
man/read_ssoct_files.Rd
man/read_vol.Rd
man/read_vol_header.Rd
man/read_vol_slo.Rd
man/spline_correction.Rd
man/strsplit_nth.Rd
man/theme_nude.Rd
man/vol_fit_spline.Rd
man/write_bscan_header.Rd
man/write_vol.Rd
man/write_vol_header.Rd
man/write_vol_slo.Rd
src/RcppExports.cpp
src/datetime_to_raw.cpp
src/raw_to_datetime.cpp
tests/testthat.R
tests/testthat/test-read_write.R
tests/testthat/test-segmentation.R
vignettes/.gitignore
vignettes/anonymizing-datetimes.Rmd
vignettes/staurenghi-layers.Rmd
