compute_permuted_cor: Shuffle randomly one expression dataset before computing the...

In barzine/barzinePhdR: Code developed while and for my PhD thesis at the EMBL-EBI

Shuffle randomly one expression dataset before computing the correlation with the same labelled rows from another dataset across the same set of different tissues

Description

Shuffle randomly one expression dataset before computing the correlation with the same labelled rows from another dataset across the same set of different tissues

Usage

compute_permuted_cor(x, y, method = "spearman")

Arguments

x	numeric data.frame for a first expression study
y	numeric data.frame for a second expression study
method	a character string indicating which correlation coefficient is to be computed. One of "pearson", "spearman", "kendall".

Value

a random permutation for compute_gene_cor

barzine/barzinePhdR documentation built on Nov. 23, 2024, 8:54 p.m.