createTableResults_basics: Format results output for two-dataframe meta-analysis
In barzine/barzinePhdR: Code developed while and for my PhD thesis at the EMBL-EBI

createTableResults_basics

R Documentation

Format results output for two-dataframe meta-analysis

Description

Format results output for two-dataframe meta-analysis

Usage

createTableResults_basics(DF1, DF2, GeneNameDic, externalSupport,
  select = "all_common", MEAN = TRUE, SD = TRUE, CV = TRUE,
  nb.Tissues = TRUE, MEDIAN = TRUE, MAD = TRUE)

Arguments

`DF1`	first data.frame to include
`DF2`	second data.frame to include
`GeneNameDic`	named character vector that maps the gene names to their identifiers
`externalSupport`	allows to include other information about the genes
`select`	'all_common' to keep only the genes that are found in both data.frames 'all' to include all genes from both data.frames
`MEAN`	logical; default: TRUE. Gives the mean value of the gene expression
`SD`	logical; default: TRUE. Gives the standard deviation of the expression of the genes.
`CV`	logical; default: TRUE. Gives the coefficient variation of the expression of the genes
`nb.Tissues`	logical; default: TRUE. The expression breadth of the genes (i.e. how many tissues the genes has been detected)
`MEDIAN`	logical; default: TRUE. Median expression of the genes
`MAD`	logical; default: TRUE median absolute deviation of the expression of the genes