createGoAnnot: Retrieve GO information for a list of genes or all genes
In barzine/barzinePhdR: Code developed while and for my PhD thesis at the EMBL-EBI

createGoAnnot

R Documentation

Retrieve GO information for a list of genes or all genes

Description

Retrieve GO information for a list of genes or all genes

Usage

createGoAnnot(queryList, biomart = "ENSEMBL_MART_ENSEMBL",
  dataset = "hsapiens_gene_ensembl", attributes = c("ensembl_gene_id",
  "name_1006", "go_id"), filters = ("ensembl_gene_id"), host)

Arguments

`queryList`	character vector; optional; id of genes
`biomart`	default: 'ENSEMBL_MART_ENSEMBL'
`dataset`	default: 'hsapiens_gene_ensembl'
`attributes`	default: c("ensembl_gene_id","name_1006", "go_id")
`filters`	default; "ensembl_gene_id"
`host`	optional;