mergeSubCluster: Merge a reclusted sub-sample back into main object
In basilkhuder/extendSC: Extends functionalities of scRNA-Seq workflows
Description
Usage
Arguments
Value
Examples
Description
Merge a reclusted sub-sample back into main object
Usage
1
mergeSubCluster(seurat.obj, subcluster.obj, cluster.replace, annotation.name)
Arguments
seurat.obj
A Seurat object.
subcluster.obj
A Seurat sub-cluster object
annotation.name
Name to store cluster annotations
cluster.repace
Clusters to replace
Value
Merged seurat object
Examples
1
mergedSubCluster(seurat.obj, subcluster.obj = seurat.sub.obj, cluster.replace = "T Cells", annotation.name = "Seurat_Assignment")
basilkhuder/extendSC documentation built on July 23, 2021, 1:17 p.m.
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Description Usage Arguments Value Examples
Description
Merge a reclusted sub-sample back into main object
Usage
1 | mergeSubCluster(seurat.obj, subcluster.obj, cluster.replace, annotation.name)
|
Arguments
seurat.obj |
A Seurat object. |
subcluster.obj |
A Seurat sub-cluster object |
annotation.name |
Name to store cluster annotations |
cluster.repace |
Clusters to replace |
Value
Merged seurat object
Examples
1 | mergedSubCluster(seurat.obj, subcluster.obj = seurat.sub.obj, cluster.replace = "T Cells", annotation.name = "Seurat_Assignment")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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