extractCounts: Easily extract counts from a Seurat object
In basilkhuder/extendSC: Extends functionalities of scRNA-Seq workflows
Description
Usage
Arguments
Value
Examples
Description
Easily extract counts from a Seurat object
Usage
1
extractCounts(seurat.obj, assay = "SCT", genes = NULL, tibble = FALSE)
Arguments
seurat.obj
A seurat object.
assay
The assay to pull from
genes
Optional argument to extract certain genes only
tibble
Whether you want counts returned as a tibble
Value
Counts
Examples
1
extractCounts(seurat.obj, assay = "RNA", genes = c("TBC1D3D","LINC00470"), tibble = TRUE)
basilkhuder/extendSC documentation built on July 23, 2021, 1:17 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
Easily extract counts from a Seurat object
Usage
1 | extractCounts(seurat.obj, assay = "SCT", genes = NULL, tibble = FALSE)
|
Arguments
seurat.obj |
A seurat object. |
assay |
The assay to pull from |
genes |
Optional argument to extract certain genes only |
tibble |
Whether you want counts returned as a tibble |
Value
Counts
Examples
1 | extractCounts(seurat.obj, assay = "RNA", genes = c("TBC1D3D","LINC00470"), tibble = TRUE)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.