probDriverMut: Calculate mutations and their probabilities

In bastiaanvdroest/DriverProbabilities: Risk analysis of mutating driver genes

Description

Calculate the number of mutations and the probabilities on this number of mutations per cells.

Usage

probDriverMut(cell_types, genes, stat_type = "mean", verbose = F)

Arguments

cell_types	Character vector indicating the cell types
genes	Character vector indicating which genes to analyse
verbose	Boolean indicating verbose mode
stat_types	Character vector indicating the types of statistic to calculate: "mean", "mean-std" and/or "mean+std"

Value

Data.frame with the number of cells, the number of mutations, the probabilities of the mutations and the input variables

Examples

probDriverMut(cell_type = "iPS", gene = "all", stat_type = "mean")

bastiaanvdroest/DriverProbabilities documentation built on Dec. 8, 2019, 10:29 a.m.