parse_beast_posterior: Parses BEAST2 output files to a posterior

In beast-dev/RBeast: Create BEAST and BEAST2 input files and parse their output

Description

Parses BEAST2 output files to a posterior

Usage

parse_beast_posterior(trees_filename, log_filename)

Arguments

trees_filename	name of the BEAST2 .trees output file
log_filename	name of the BEAST2 .trees output file

Value

a posterior

Author(s)

Richel J.C. Bilderbeek

Examples

  trees_filename <- system.file(
   "extdata", "beast2_example_output.trees", package = "RBeast"
  )
  log_filename <- system.file(
   "extdata", "beast2_example_output.log", package = "RBeast"
  )
  posterior <- parse_beast_posterior(
    trees_filename = trees_filename,
    log_filename = log_filename
  )
  testit::assert(is_posterior(posterior))

beast-dev/RBeast documentation built on May 12, 2019, 10:02 a.m.