parse_beast_trees: Parses a BEAST2 .trees output file
In beast-dev/RBeast: Create BEAST and BEAST2 input files and parse their output
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Parses a BEAST2 .trees output file
Usage
1
parse_beast_trees(filename)
Arguments
filename
name of the BEAST2 .trees output file
Value
the phylogenies in the posterior
Author(s)
Richel J.C. Bilderbeek
Examples
1
2
3
4
5
6
7
trees_filename <- system.file(
"extdata", "beast2_example_output.trees", package = "RBeast"
)
posterior <- parse_beast_trees(
filename = trees_filename
)
testit::assert(is_trees_posterior(posterior))
beast-dev/RBeast documentation built on May 12, 2019, 10:02 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
Parses a BEAST2 .trees output file
Usage
1 | parse_beast_trees(filename)
|
Arguments
filename |
name of the BEAST2 .trees output file |
Value
the phylogenies in the posterior
Author(s)
Richel J.C. Bilderbeek
Examples
1 2 3 4 5 6 7 | trees_filename <- system.file(
"extdata", "beast2_example_output.trees", package = "RBeast"
)
posterior <- parse_beast_trees(
filename = trees_filename
)
testit::assert(is_trees_posterior(posterior))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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