exprsToLong: Transform an expression matrix to long table

In bedapub/ribiosExpression: Expression Analysis with RibiosExpression

Transform an expression matrix to long table

Description

Transform an expression matrix to long table

Usage

exprsToLong(x, ...)

## S4 method for signature 'matrix'
exprsToLong(
  x,
  idvar = "illID",
  timevar = "hybridID",
  valuevar = "value",
  ids = rownames(x),
  valueType = "raw"
)

## S4 method for signature 'eSet'
exprsToLong(x)

Arguments

x	A matrix or an ExpressionSet object
...	Other parameters
idvar	Variable name of the feature identifier, passed to reshape
timevar	The time variable, passed to reshape
valuevar	The value variable
ids	Feature identifiers
valueType	Character string, value type

Value

A data.frame

Methods (by class)

• exprsToLong(matrix): The method for matrix as input

• exprsToLong(eSet): The method for eSet as input

bedapub/ribiosExpression documentation built on Sept. 2, 2023, 4:37 a.m.