Man pages for berkgurdamar/predatoR
Mutation Impact Prediction Based on Network Properties
| adaboost_5_all | All atoms used model |
| adaboost_7_ca | Only Cα atoms used model |
| amino_acid_features | Amino Acid Features |
| betweenness_score | Betweenness Score |
| blosum62_score | BLOSUM62 Score |
| clique_score | Clique Score |
| degree_score | Degree Score |
| DisGeNET | Disease-Gene relationship from DisGeNET |
| eigen_centrality_score | Eigen Centrality Score |
| gene_essentiality | Gene Essentiality Score |
| genic_intolerance | Genic Intolerance Score |
| gnomad_scores | GnomAD Scores |
| GO_terms | GO Term Number from Gene Name |
| GTEx | GTEx Median Expression Function |
| impact_prediction | Impact Prediction |
| kegg_pathway_number | KEGG Pathway Number from Gene Name |
| pagerank_score | PageRank Score |
| PDB2connections | Creating edge list from atom matrix |
| predatoR | Mutation impact Prediction |
| read_PDB | PDB Reading/Downloading |
| shorteset_path_score | Shortest Path Score |
