clique_score: Clique Score

In berkgurdamar/predatoR: Mutation Impact Prediction Based on Network Properties

Clique Score

Description

For each node, calculates the number of edges between neighbors of a node. Converts to scores into Z-Scores and returns the scores of input positions.

Usage

clique_score(edge_list, filtered_info_df, n_threads = NULL, single_run = TRUE)

Arguments

edge_list	list contains separate edge data.frames for each chain
filtered_info_df	input data.frame which contain only one PDB entries
n_threads	number of threads (default = NULL)
single_run	should be set as TRUE when using clique_score function alone (default = TRUE)

Value

Clique Z-Scores of input position

berkgurdamar/predatoR documentation built on Jan. 10, 2023, 10:51 p.m.