Man pages for bernatgel/karyoploteR
Plot customizable linear genomes displaying arbitrary data

addGeneNamesaddGeneNames
autotrackautotrack
colByChrcolByChr
colByRegioncolByRegion
colByValuecolByValue
darkerdarker
filterParamsfilterParams
findIntersectionsfindIntersections
getChromosomeNamesBoundingBoxgetChromosomeNamesBoundingBox
getColorSchemasgetColorSchemas
getCytobandColorsgetCytobandColors
getCytobandsgetCytobands
getDataPanelBoundingBoxgetDataPanelBoundingBox
getDefaultPlotParamsgetDefaultParameters
getMainTitleBoundingBoxgetMainTitleBoundingBox
getTextSizegetTextSize
getVariantsColorsgetVariantsColors
horizonColorshorizonColors
is.coloris.color
kpAblinekpAbline
kpAddBaseNumberskpAddBaseNumbers
kpAddChromosomeNameskpAddChromosomeNames
kpAddChromosomeSeparatorskpAddChromosomeSeparators
kpAddCytobandLabelskpAddCytobandLabels
kpAddCytobandskpAddCytobands
kpAddCytobandsAsLinekpAddCytobandsAsLine
kpAddLabelskpAddLabels
kpAddMainTitlekpAddMainTitle
kpAreakpArea
kpArrowskpArrows
kpAxiskpAxis
kpBarskpBars
kpDataBackgroundkpDataBackground
kpHeatmapkpHeatmap
kpLineskpLines
kpPlotBAMCoveragekpPlotBAMCoverage
kpPlotBAMDensitykpPlotBAMDensity
kpPlotBigWigkpPlotBigWig
kpPlotCoveragekpCoverage
kpPlotDensitykpPlotDensity
kpPlotGeneskpPlotGenes
kpPlotHorizonkpPlotHorizon
kpPlotLinkskpPlotLinks
kpPlotLoesskpPlotLoess
kpPlotManhattankpPlotManhattan
kpPlotMarkerskpPlotMarkers
kpPlotNameskpPlotNames
kpPlotRainfallkpPlotRainfall
kpPlotRegionskpPlotRegions
kpPlotRibbonkpPlotRibbon
kpPlotTranscriptskpPlotTranscripts
kpPointskpPoints
kpPolygonkpPolygon
kpRectkpRect
kpSegmentskpSegments
kpTextkpText
lighterlighter
makeGenesDataFromTxDbmakeGenesDataFromTxDb
mergeTranscriptsmergeTranscripts
plotDefaultPlotParamsplotDefaultPlotParameters
plotKaryotypeplotKaryotype
plotPalettesplotPalette
prepareParameters2prepareParameters2
prepareParameters4prepareParameters4
processClippingprocessClipping
transparenttransparent
bernatgel/karyoploteR documentation built on Nov. 12, 2019, 12:44 p.m.