Files in betsig/branchpointer
Prediction of intronic splicing branchpoints

.Rbuildignore

.gitignore

DESCRIPTION

LICENSE

NAMESPACE

R/gtfToExons.R R/makeBranchpointWindowForExons.R R/makeBranchpointWindowForSNP.R R/plotBranchpointWindow.R R/predictBranchpoints.R R/predictionsToSummary.R R/readQueryFile.R

R/sysdata.rda

inst/CITATION

inst/NEWS

inst/extdata/SNP_example.txt

inst/extdata/gencode.v26.annotation.small.gtf

inst/extdata/intron_example.txt

inst/scripts/Intron_Annotation_Times.R inst/scripts/NHGRI_GWAS_SNPS.R inst/scripts/predictBranchpoints_Times.R inst/scripts/readQueryFile_Filter_Time.R man/exonsToIntrons.Rd man/getBranchpointSequence.Rd man/getCanonical3SS.Rd man/getExonDists.Rd man/getPPT.Rd man/getQueryLoc.Rd man/gtfToExons.Rd man/makeBranchpointWindowForExons.Rd man/makeBranchpointWindowForSNP.Rd man/plotBranchpointWindow.Rd man/plotStructure.Rd man/predictBranchpoints.Rd man/predictionsToSummary.Rd man/readQueryFile.Rd

vignettes/branchpointer.Rnw

vignettes/predictBranchpoints_time.pdf vignettes/readQueryFile_time.pdf

betsig/branchpointer documentation built on Sept. 27, 2021, 10:31 p.m.

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