exonsToIntrons: Convert exon annotation GRanges to intron locations
In betsig/branchpointer: Prediction of intronic splicing branchpoints
Description
Usage
Arguments
Value
Author(s)
View source: R/readQueryFile.R
Description
Converts exon annotation to intron locations overlapping the branchpoint region
for exculsion of non-branchpoint region SNPs
Returns a character vector of chromosome locations
Usage
1
exonsToIntrons(exons, maxDist = 50)
Arguments
exons
GRanges containing exon co-ordinates.
Should be produced by gtfToExons()
maxDist
Maximum distance from the 3' exon to create the branchpoint region.
Value
GRanges containing intron window co-ordinates
Author(s)
Beth Signal
betsig/branchpointer documentation built on Sept. 27, 2021, 10:31 p.m.
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Description Usage Arguments Value Author(s)
View source: R/readQueryFile.R
Description
Converts exon annotation to intron locations overlapping the branchpoint region for exculsion of non-branchpoint region SNPs Returns a character vector of chromosome locations
Usage
1 | exonsToIntrons(exons, maxDist = 50)
|
Arguments
exons |
GRanges containing exon co-ordinates. Should be produced by gtfToExons() |
maxDist |
Maximum distance from the 3' exon to create the branchpoint region. |
Value
GRanges containing intron window co-ordinates
Author(s)
Beth Signal
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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