summarize_fit: Summarize fit
In bhagwataditya/importomics: Unified statistal Modeling of Omics Data
summarize_fit R Documentation
Summarize fit
Description
Summarize fit
Usage
summarize_fit(
featuredt,
fit = fits(featuredt),
coefs = autonomics::coefs(featuredt, fit = fit)
)
Arguments
featuredt
fdt(object)
fit
'limma', 'lme', 'lm', 'lme', 'wilcoxon' or NULL
coefs
string vector
Value
data.table(contrast, nup, ndown)
Examples
file <- system.file('extdata/atkin.metabolon.xlsx', package = 'autonomics')
object <- read_metabolon(file)
object %<>% fit_limma()
object %<>% fit_lm()
summarize_fit(fdt(object), coefs = c('t1', 't2', 't3'))
bhagwataditya/importomics documentation built on May 1, 2024, 2:01 a.m.
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| summarize_fit | R Documentation |
Summarize fit
Description
Summarize fit
Usage
summarize_fit(
featuredt,
fit = fits(featuredt),
coefs = autonomics::coefs(featuredt, fit = fit)
)
Arguments
featuredt |
fdt(object) |
fit |
'limma', 'lme', 'lm', 'lme', 'wilcoxon' or NULL |
coefs |
string vector |
Value
data.table(contrast, nup, ndown)
Examples
file <- system.file('extdata/atkin.metabolon.xlsx', package = 'autonomics')
object <- read_metabolon(file)
object %<>% fit_limma()
object %<>% fit_lm()
summarize_fit(fdt(object), coefs = c('t1', 't2', 't3'))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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