queryUnichemCompound: Query UniChem for a compound.

In bhklab/AnnotationGx: AnnotationGx: A package for building, updating and querying an annotation database for pharmaco-genomic data

Query UniChem for a compound.

Description

This function queries the UniChem API for a compound based on the provided parameters.

Usage

queryUnichemCompound(
  compound,
  type,
  sourceID = NA_integer_,
  request_only = FALSE,
  raw = FALSE,
  ...
)

Arguments

compound	character or integer The compound identifier to search for.
type	character The type of compound identifier to search for. Valid types are "uci", "inchi", "inchikey", and "sourceID".
sourceID	integer The source ID to search for if the type is "sourceID". Defaults to NULL.
request_only	boolean Whether to return the request only. Defaults to FALSE.
raw	boolean Whether to return the raw response. Defaults to FALSE.
...	Additional arguments.

Value

A list with the external mappings and the UniChem mappings.

Examples

queryUnichemCompound(type = "sourceID", compound = "444795", sourceID = 22)

bhklab/AnnotationGx documentation built on April 3, 2025, 4:27 p.m.