dot-summarizeSensProfiles: Summarize the sensitivity profiles when the sensitivity slot...
In bhklab/PharmacoGx: Analysis of Large-Scale Pharmacogenomic Data
.summarizeSensProfiles R Documentation
Summarize the sensitivity profiles when the sensitivity slot is a LongTable
Description
Summarize the sensitivity profiles when the sensitivity slot is a LongTable
Usage
.summarizeSensProfiles(
object,
sensitivity.measure = "auc_recomputed",
profiles_assay = "profiles",
treatment_col = "treatmentid",
sample_col = "sampleid",
cell.lines,
drugs,
summary.stat,
fill.missing = TRUE
)
Value
matrix A matrix with cell lines going down the rows, drugs across
the columns, with the selected sensitivity statistic for each pair.
bhklab/PharmacoGx documentation built on April 18, 2024, 3:13 a.m.
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| .summarizeSensProfiles | R Documentation |
Summarize the sensitivity profiles when the sensitivity slot is a LongTable
Description
Summarize the sensitivity profiles when the sensitivity slot is a LongTable
Usage
.summarizeSensProfiles(
object,
sensitivity.measure = "auc_recomputed",
profiles_assay = "profiles",
treatment_col = "treatmentid",
sample_col = "sampleid",
cell.lines,
drugs,
summary.stat,
fill.missing = TRUE
)
Value
matrix A matrix with cell lines going down the rows, drugs across the columns, with the selected sensitivity statistic for each pair.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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