DownloadFromGEO: Download RIRA data from GEO
In bimberlabinternal/RIRA_classification: A package for the Rhesus Immune Reference Atlas (RIRA): A multi-tissue single-cell landscape of immune cells
DownloadFromGEO R Documentation
Download RIRA data from GEO
Description
This will download the RIRA raw data from GEO, as a Seurat object
Usage
DownloadFromGEO(outfile = NULL, subset = c("All", "T_NK", "Myeloid", "Bcell"))
Arguments
outfile
This location to initially download the raw data. If omitted or NULL, it will download the RDS to the temporary file folder and delete it on completion. However, because the download is large it may be useful to download to a location you plan to keep.
subset
The cell subset to download, either All, T_NK, Myeloid, BCell or Other
bimberlabinternal/RIRA_classification documentation built on April 14, 2025, 5:59 p.m.
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| DownloadFromGEO | R Documentation |
Download RIRA data from GEO
Description
This will download the RIRA raw data from GEO, as a Seurat object
Usage
DownloadFromGEO(outfile = NULL, subset = c("All", "T_NK", "Myeloid", "Bcell"))
Arguments
outfile |
This location to initially download the raw data. If omitted or NULL, it will download the RDS to the temporary file folder and delete it on completion. However, because the download is large it may be useful to download to a location you plan to keep. |
subset |
The cell subset to download, either All, T_NK, Myeloid, BCell or Other |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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