Files in bioShaun/omplotr
store plot functions & themes for onmath projects
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/om_go.R
R/om_qc.R
R/om_quant.R
R/om_reseq_basic.R
R/om_themes.R
R/utils.R
README.Rmd
README.md
data/cluster_test.RData
data/cor_plot_col.RData
data/diff_test.RData
data/exp_test.RData
data/gc_test.RData
data/go_test.RData
data/heatmap_col.RData
data/om_const_reseq_variant.RData
data/om_test_var_stats.RData
data/rq_test.RData
data/sample_cols.RData
data/test_sample.RData
inst/extdata/all_sample.genome.cov.xls
inst/extdata/all_sample.mapping.xls
inst/extdata/enrichment/example.go.enrichment.txt
inst/extdata/enrichment/example.kegg.enrichment.txt
inst/extdata/topgo_test_data.txt
inst/extdata/variant_stats/all_sample.varEffects.count.summary.xls
inst/extdata/variant_stats/all_sample.varHoHe.count.summary.xls
inst/extdata/variant_stats/all_sample.varImpact.count.summary.xls
inst/extdata/variant_stats/all_sample.varRegion.count.summary.xls
inst/extdata/variant_stats/all_sample.varType.count.summary.xls
inst/extdata/variant_stats/snpeff_varEffects.csv
man/gc_line_plot.Rd
man/om_boxplot.Rd
man/om_bwa_mapping_plot.Rd
man/om_cluster_plot.Rd
man/om_correlation_plot.Rd
man/om_enrich_bar_plot.Rd
man/om_goseq.Rd
man/om_heatmap.Rd
man/om_pca_plot.Rd
man/om_reads_cov_plot.Rd
man/om_topgo.Rd
man/om_var_pie_plot.Rd
man/om_var_pie_stats.Rd
man/om_var_summary_plot.Rd
man/om_volcano_plot.Rd
man/reads_quality_plot.Rd
man/theme_onmath.Rd
omplotr.Rproj
show/README-bwa-mapping-1.png
show/README-bwa-mapping-2.png
show/README-exp-box-1.png
show/README-exp-box-2.png
show/README-exp-box-3.png
show/README-exp-box-merged-1.png
show/README-exp-cluster-1.png
show/README-exp-cor-1.png
show/README-exp-heatmap-1.png
show/README-exp-pca-1.png
show/README-exp-volcano-merge-1.png
show/README-exp-volcano-single-1.png
show/README-fastqc-gc-1.png
show/README-fastqc-reads-quality-1.png
show/README-go-1.png
show/README-go-2.png
show/README-go-3.png
show/README-go_dag-1.png
show/README-go_dag-2.png
show/README-go_dag-3.png
show/README-go_enrich-1.png
show/README-reads-cov-1.png
show/README-reads-cov-2.png
show/README-theme_onmath-1.png
show/README-var-por-1.png
show/README-var-summary-1.png
vignettes/.gitignore
vignettes/my-vignette.Rmd
