artMS provides a set of tools for the analysis of proteomics label-free datasets. It takes as input the MaxQuant search result output (evidence.txt file) and performs quality control, relative quantification using MSstats, downstream analysis and integration. artMS also provides a set of functions to re-format and make it compatible with other analytical tools, including, SAINTq, SAINTexpress, Phosfate, and PHOTON.
|Author||David Jimenez-Morales, Alexandre Rosa Campos, John Von Dollen.|
|Bioconductor views||Annotation BiomedicalInformatics Clustering DifferentialExpression GeneSetEnrichment MassSpectrometry Normalization Proteomics QualityControl SystemsBiology|
|Maintainer||David Jimenez-Morales <[email protected]>|
|License||GPL (>= 3) + file LICENSE|
|Package repository||View on GitHub|
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