reduce_GSEA_results: Reducing GSEA results with Weighted Set Cover
In bioinfo00/xnnet0: Explainable neural network classification
Description
Usage
Arguments
Value
View source: R/xnnet_functions_v0.1.R
Description
Size constrained weighted set cover problem to find top N sets while
maximizing the coverage of all elements.
Usage
1
reduce_GSEA_results(GSEA_results, topN = 10)
Arguments
GSEA_results
GSEA results (output of get_GSEA_results)
topN
The number of sets (or less when it completes early) to return.
Value
A list of topSets and coverage.
- topSets
A list of set IDs.
- coverage
The percentage of IDs covered in the top sets.
bioinfo00/xnnet0 documentation built on Sept. 16, 2020, 8:22 a.m.
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Description Usage Arguments Value
View source: R/xnnet_functions_v0.1.R
Description
Size constrained weighted set cover problem to find top N sets while maximizing the coverage of all elements.
Usage
1 | reduce_GSEA_results(GSEA_results, topN = 10)
|
Arguments
GSEA_results |
GSEA results (output of get_GSEA_results) |
topN |
The number of sets (or less when it completes early) to return. |
Value
A list of topSets and coverage.
- topSets
A list of set IDs.
- coverage
The percentage of IDs covered in the top sets.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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