sponge_plot_network: Plot a sponge network

View source: R/fn_plots.R

sponge_plot_networkR Documentation

Plot a sponge network

Description

Plot a sponge network

Usage

sponge_plot_network(
  sponge_result,
  mir_data,
  layout = "layout.fruchterman.reingold",
  force.directed = FALSE,
  ...
)

Arguments

sponge_result

ceRNA interactions as produced by the sponge method.

mir_data

miRNA interactions as produced by sponge_gene_miRNA_interaction_filter

layout

one of the layout methods supported in the visNetwork package

force.directed

whether to produce a force directed network, gets slow for large networks

...

further params for sponge_network

Value

shows a plot

Examples

sponge_plot_network(ceRNA_interactions, mir_interactions)

biomedbigdata/SPONGE documentation built on Feb. 6, 2023, 10:19 p.m.