Files in biostuff/CNVPanelizer
Reliable CNV detection in targeted sequencing applications
DESCRIPTION
NAMESPACE
NEWS
R/FolderAnalysis_functions.R
R/Library.R
R/SyntheticData.R
R/server.R
R/ui.R
README.md
data/referenceReadCounts.RData
data/sampleReadCounts.RData
inst/extdata/regions.bed
inst/extdata/www/CNVPanelizerLogo.png
inst/extdata/www/favicon.png
inst/unitTests/test_testing.R
man/Background.Rd
man/BedToGenomicRanges.Rd
man/BootList.Rd
man/CNVPanelizer-package.Rd
man/CNVPanelizerFromReadCounts.Rd
man/CNVPanelizerFromReadCountsHelper.Rd
man/CollectColumnFromAllReportTables.Rd
man/CombinedNormalizedCounts.Rd
man/IndexMultipleBams.Rd
man/NormalizedCounts.Rd
man/PlotBootstrapDistributions.Rd
man/ReadCountsFromBam.Rd
man/ReadXLSXToList.Rd
man/ReportTables.Rd
man/RunCNVPanelizerShiny.Rd
man/SelectReferenceSetByInterquartileRange.Rd
man/SelectReferenceSetByKmeans.Rd
man/SelectReferenceSetByPercentil.Rd
man/SelectReferenceSetFromReadCounts.Rd
man/StatusHeatmap.Rd
man/WriteListToXLSX.Rd
man/referenceReadCounts.Rd
man/sampleReadCounts.Rd
run_tests.R
tests/runTests.R
vignettes/CNVPanelizer.Rnw
vignettes/CNVPanelizer.bib
