icaSetCarbayo: IcaSet-object containing a FastICA decomposition of gene...
In bitona/MineICA: Analysis of an ICA decomposition obtained on genomics data
icaSetCarbayo R Documentation
IcaSet-object containing a FastICA decomposition of gene expression microarrray-based data of bladder cancer samples.
Description
Object of class IcaSet containing an ICA
decomposition calculated by the FastICA algorithm
(through matlab function "icasso") on bladder cancer
expression data measured on HG-U133A Affymetrix
microarrays. The original expression data were normalized
with MAS5 by the authors of the paper followed by
log2-transformation. ICA was run on the dataset
restricted to the 10000 most variable probe sets (based
on IQR values). 10 components were computed. Only probe
sets/genes having an absolute projection higher than 3
are stored in this object.
Author(s)
Anne Biton
References
bitona/MineICA documentation built on April 23, 2023, 1:41 p.m.
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| icaSetCarbayo | R Documentation |
IcaSet-object containing a FastICA decomposition of gene expression microarrray-based data of bladder cancer samples.
Description
Object of class IcaSet containing an ICA
decomposition calculated by the FastICA algorithm
(through matlab function "icasso") on bladder cancer
expression data measured on HG-U133A Affymetrix
microarrays. The original expression data were normalized
with MAS5 by the authors of the paper followed by
log2-transformation. ICA was run on the dataset
restricted to the 10000 most variable probe sets (based
on IQR values). 10 components were computed. Only probe
sets/genes having an absolute projection higher than 3
are stored in this object.
Author(s)
Anne Biton
References
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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