icaSetRiester: IcaSet-object containing a FastICA decomposition of gene...

icaSetRiesterR Documentation

IcaSet-object containing a FastICA decomposition of gene expression microarrray-based data of bladder cancer samples.

Description

Object of class IcaSet containing an ICA decomposition calculated by the FastICA algorithm (through matlab function "icasso") on gene expression data of urothelial tumors. measured on a HG-U133-plus2 Affymetrix microarrays. It contains 20 independent components. The original expression data contain 93 tumor samples, were normalized with GCRMA with log2-transformation, and are restricted to the 10000 most variable probe sets.

Author(s)

Anne Biton

References

http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE31684


bitona/MineICA documentation built on April 23, 2023, 1:41 p.m.