bb_import_seacr_peaks: Import Peaks from SEACR
In blaserlab/blaseRtools: R Tools for Blaser Lab Data Analysis
bb_import_seacr_peaks R Documentation
Import Peaks from SEACR
Description
The function reads peaks in .bed file format produced by SEACR. Optionally add a group variable and value for later filtering or faceting when combined with other peak files.
Usage
bb_import_seacr_peaks(file, group_variable = NULL, group_value)
Arguments
file
file path to the SEACR .bed file
group_variable
An optional variable name for additional group metadata. PARAM_DESCRIPTION, Default: NULL
group_value
A value supplied to the group metadata variable. Required if group_variable is not NULL. PARAM_DESCRIPTION
Value
A GRanges object
See Also
read_delim
select, mutate
makeGRangesFromDataFrame
blaserlab/blaseRtools documentation built on April 14, 2025, 6:04 p.m.
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| bb_import_seacr_peaks | R Documentation |
Import Peaks from SEACR
Description
The function reads peaks in .bed file format produced by SEACR. Optionally add a group variable and value for later filtering or faceting when combined with other peak files.
Usage
bb_import_seacr_peaks(file, group_variable = NULL, group_value)
Arguments
file |
file path to the SEACR .bed file |
group_variable |
An optional variable name for additional group metadata. PARAM_DESCRIPTION, Default: NULL |
group_value |
A value supplied to the group metadata variable. Required if group_variable is not NULL. PARAM_DESCRIPTION |
Value
A GRanges object
See Also
read_delim
select, mutate
makeGRangesFromDataFrame
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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