perform_t_tests_all_classes_one_vs_rest: Comparison of one class against all others
In bozdaglab/CTDPathSim2.0: Computing multi-omics driven similarity scores between patient tumor samples and cell lines for personalized medicine
perform_t_tests_all_classes_one_vs_rest R Documentation
Comparison of one class against all others
Description
For each row of a matrix, this function performs T-tests comparing the values
of that row for samples in one class against the values in that row for all
other samples. Such comparisons are done for each reference class in turn.
Usage
perform_t_tests_all_classes_one_vs_rest(data_matrix, class_vector)
Arguments
data_matrix
Matrix containing the data for all samples. Columns
correspond to different samples.
class_vector
A vector of numbers or strings representing the classes
associated with each column in data_matrix.
Value
A list containing:
p.valuesA matrix containing the p-values
for each comparison. Each column corresponds to the comparison between a
class and all others.
diff.meansA matrix containing the
difference between group means for each comparison. Each column corresponds
to the comparison between a class and all others.
bozdaglab/CTDPathSim2.0 documentation built on April 14, 2022, 12:39 a.m.
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| perform_t_tests_all_classes_one_vs_rest | R Documentation |
Comparison of one class against all others
Description
For each row of a matrix, this function performs T-tests comparing the values of that row for samples in one class against the values in that row for all other samples. Such comparisons are done for each reference class in turn.
Usage
perform_t_tests_all_classes_one_vs_rest(data_matrix, class_vector)
Arguments
data_matrix |
Matrix containing the data for all samples. Columns correspond to different samples. |
class_vector |
A vector of numbers or strings representing the classes
associated with each column in |
Value
A list containing:
p.valuesA matrix containing the p-values for each comparison. Each column corresponds to the comparison between a class and all others.
diff.meansA matrix containing the difference between group means for each comparison. Each column corresponds to the comparison between a class and all others.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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