get.effects.limma: Get effectsizes from limma lmFit object
In bramburger/colvano: Provide Intervals for Volcano Plots
Description
This function calculates effect sizes for lmFit object, assuming a single independent variable.
Usage
1
get.effects.limma(fit, data, protein.names)
Arguments
fit
the lmFit object
data
data.frame, matrix or similar containing only the data to be used to calculate effect sizes. (no protein names, etc)
protein.names
a vector containing the names of the proteins. Should be the same length as the number of rows in data
bramburger/colvano documentation built on Nov. 4, 2019, 8:12 a.m.
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Description
This function calculates effect sizes for lmFit object, assuming a single independent variable.
Usage
1 | get.effects.limma(fit, data, protein.names)
|
Arguments
fit |
the lmFit object |
data |
data.frame, matrix or similar containing only the data to be used to calculate effect sizes. (no protein names, etc) |
protein.names |
a vector containing the names of the proteins. Should be the same length as the number of rows in |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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