nh_plotR: NewHybrids Plot
In bwringe/hybriddetective: Automates the process of detecting hybrids from genetic data
nh_plotR R Documentation
NewHybrids Plot
Description
nh_plotR plots the cumulative probabilities of assignment for each individual
Usage
nh_plotR(NHResults, ColourVector = c("red", "blue", "grey", "green", "black",
"yellow"), ReversePure = 1)
Arguments
NHResults
A file path to the NewHybrids (PofZ file) result to be plotted
ColourVector
A vector of six colours to be plotted as Pure1, Pure2, F1, F2, BC1, and BC2 respectively
ReversePure
A logical which can be used to reverse the Pure1/BC1, Pure2/BC2 colours if NEWHYBRIDS switches which population is called Population1 and Population2 between analyses of the same data (allows you to make your plots the same colours). Options are "1" or "2"
bwringe/hybriddetective documentation built on March 22, 2023, 6:52 a.m.
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| nh_plotR | R Documentation |
NewHybrids Plot
Description
nh_plotR plots the cumulative probabilities of assignment for each individual
Usage
nh_plotR(NHResults, ColourVector = c("red", "blue", "grey", "green", "black",
"yellow"), ReversePure = 1)
Arguments
NHResults |
A file path to the NewHybrids (PofZ file) result to be plotted |
ColourVector |
A vector of six colours to be plotted as Pure1, Pure2, F1, F2, BC1, and BC2 respectively |
ReversePure |
A logical which can be used to reverse the Pure1/BC1, Pure2/BC2 colours if NEWHYBRIDS switches which population is called Population1 and Population2 between analyses of the same data (allows you to make your plots the same colours). Options are "1" or "2" |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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