Files in c5sire/brapi
Client to Access Breeding Databases Using BrAPI

.Rbuildignore
.Rinstignore
.gitignore
.lintr
.travis.yml
DESCRIPTION
NAMESPACE
NEWS.md R/ams2tbl.R R/as.ba_db.R R/ba_calls.R R/ba_can_internet.R R/ba_check.R R/ba_commoncropnames.R R/ba_connect.R R/ba_crops.R R/ba_db.R R/ba_genomemaps.R R/ba_genomemaps_data.R R/ba_genomemaps_data_range.R R/ba_genomemaps_details.R R/ba_germplasm_attributes.R R/ba_germplasm_breedingmethods.R R/ba_germplasm_breedingmethods_details.R R/ba_germplasm_details.R R/ba_germplasm_details_study.R R/ba_germplasm_markerprofiles.R R/ba_germplasm_pedigree.R R/ba_germplasm_progeny.R R/ba_germplasm_search.R R/ba_germplasm_search_post.R R/ba_germplasmattributes_attributes.R R/ba_germplasmattributes_categories.R R/ba_germplasmattributes_details.R R/ba_locations.R R/ba_locations_details.R R/ba_login.R R/ba_logout.R R/ba_markerprofiles_allelematrices_details.R R/ba_markerprofiles_allelematrices_search.R R/ba_markerprofiles_allelematrices_search_post.R R/ba_markerprofiles_allelematrix_search.R R/ba_markerprofiles_details.R R/ba_markerprofiles_search.R R/ba_markers_details.R R/ba_markers_search.R R/ba_markers_search_post.R R/ba_message.R R/ba_observationvariables.R R/ba_observationvariables_datatypes.R R/ba_observationvariables_details.R R/ba_observationvariables_ontologies.R R/ba_observationvariables_search_post.R R/ba_phenotypes_search.R R/ba_phenotypes_search_post.R R/ba_programs.R R/ba_programs_search_post.R R/ba_samples.R R/ba_samples_save.R R/ba_samples_search.R R/ba_samples_search_post.R R/ba_show_expiration.R R/ba_show_info.R R/ba_studies_details.R R/ba_studies_germplasm_details.R R/ba_studies_layout.R R/ba_studies_observationlevels.R R/ba_studies_observations.R R/ba_studies_observationunits.R R/ba_studies_observationunits_save.R R/ba_studies_observationvariables.R R/ba_studies_search.R R/ba_studies_search_post.R R/ba_studies_seasons.R R/ba_studies_studytypes.R R/ba_studies_table.R R/ba_studies_table_save.R R/ba_traits.R R/ba_traits_details.R R/ba_trials.R R/ba_trials_details.R R/ba_vendor_plates_details.R R/ba_vendor_plates_search.R R/ba_vendor_plates_search_post.R R/ba_vendor_specifications.R R/baps2rclass.R R/brapi-deprecated.R R/brapi-package.r R/brapiGET.R R/brapiPOST.R R/brapiPUT.R R/check_ba.R R/check_character.R R/check_deprecated.R R/check_paging.R R/check_rclass.R R/check_req.R R/check_req_any.R R/complement_missing_fields.R R/dat2tbl.R R/df2tibble.R R/get_body.R R/get_brapi.R R/get_endpoint.R R/get_ppages.R R/gp2tbl.R R/is.ba_con.R R/is.ba_status_ok.R R/join_slaves.R R/loc2tbl.R R/locd2tbl.R R/lyt2tbl.R R/match_req.R R/mpa2tbl.R R/print-methods.R R/sgp2tbl.R R/show_metadata.R R/show_pagination.R R/show_server_status_messages.R R/skip_if_local.R R/sou2tbl.R R/sov2tbl.R R/std2tbl.R R/stdd2tbl.R R/template-depr_fun.R R/test_dbs.R R/trl2tbl2.R R/trld2tbl2.R R/zzz.R README.Rmd README.md
appveyor.yml
brapi.Rproj
codecov.yml
docs/articles/index.html
docs/articles/tutorial.html
docs/articles/tutorial_files/crosstalk-1.0.0/css/crosstalk.css
docs/articles/tutorial_files/crosstalk-1.0.0/js/crosstalk.js
docs/articles/tutorial_files/crosstalk-1.0.0/js/crosstalk.js.map
docs/articles/tutorial_files/crosstalk-1.0.0/js/crosstalk.min.js
docs/articles/tutorial_files/crosstalk-1.0.0/js/crosstalk.min.js.map
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docs/articles/tutorial_files/datatables-binding-0.4/datatables.js
docs/articles/tutorial_files/datatables-binding-0.4/datatables.yaml
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docs/reference/ba_calls.html
docs/reference/ba_can_internet.html
docs/reference/ba_check.html
docs/reference/ba_connect.html
docs/reference/ba_crops.html
docs/reference/ba_db.html
docs/reference/ba_genomemaps.html
docs/reference/ba_genomemaps_data.html
docs/reference/ba_genomemaps_data_range.html
docs/reference/ba_genomemaps_details.html
docs/reference/ba_germplasm_attributes.html
docs/reference/ba_germplasm_details.html
docs/reference/ba_germplasm_details_study.html
docs/reference/ba_germplasm_markerprofiles.html
docs/reference/ba_germplasm_pedigree.html
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docs/reference/ba_germplasmattributes.html
docs/reference/ba_germplasmattributes_categories.html
docs/reference/ba_germplasmattributes_details.html
docs/reference/ba_locations.html
docs/reference/ba_login.html
docs/reference/ba_logout.html
docs/reference/ba_markerprofiles_allelematrix_search.html
docs/reference/ba_markerprofiles_details.html
docs/reference/ba_markerprofiles_search.html
docs/reference/ba_markers_details.html
docs/reference/ba_markers_search.html
docs/reference/ba_observationvariables.html
docs/reference/ba_observationvariables_datatypes.html
docs/reference/ba_observationvariables_details.html
docs/reference/ba_observationvariables_ontologies.html
docs/reference/ba_observationvariables_search.html
docs/reference/ba_phenotypes_search.html
docs/reference/ba_programs.html
docs/reference/ba_programs_search.html
docs/reference/ba_samples.html
docs/reference/ba_samples_save.html
docs/reference/ba_show_expiration.html
docs/reference/ba_show_info.html
docs/reference/ba_studies_details.html
docs/reference/ba_studies_layout.html
docs/reference/ba_studies_observationlevels.html
docs/reference/ba_studies_observations.html
docs/reference/ba_studies_observationunits.html
docs/reference/ba_studies_observationunits_save.html
docs/reference/ba_studies_observationvariables.html
docs/reference/ba_studies_search.html
docs/reference/ba_studies_seasons.html
docs/reference/ba_studies_studytypes.html
docs/reference/ba_studies_table.html
docs/reference/ba_studies_table_save.html
docs/reference/ba_traits.html
docs/reference/ba_traits_details.html
docs/reference/ba_trials.html
docs/reference/ba_trials_details.html
docs/reference/brapi.html
docs/reference/index.html
docs/reference/is.ba_con.html
docs/reference/print.ba_con.html
docs/reference/print.ba_db_list.html
inst/examples/ex-as_ba_db.R inst/examples/ex-ba_check.R inst/examples/ex-ba_commoncropnames.R inst/examples/ex-ba_crops.R inst/examples/ex-ba_db.R inst/examples/ex-ba_genomemaps.R inst/examples/ex-ba_genomemaps_data.R inst/examples/ex-ba_genomemaps_data_range.R inst/examples/ex-ba_germplasm_attributes.R inst/examples/ex-ba_germplasm_breedingmethods.R inst/examples/ex-ba_germplasm_breedingmethods_details.R inst/examples/ex-ba_germplasm_details.R inst/examples/ex-ba_germplasm_details_study.R inst/examples/ex-ba_germplasm_markerprofiles.R inst/examples/ex-ba_germplasm_pedigree.R inst/examples/ex-ba_germplasm_progeny.R inst/examples/ex-ba_germplasm_search.R inst/examples/ex-ba_germplasm_search_post.R inst/examples/ex-ba_germplasmattributes.R inst/examples/ex-ba_germplasmattributes_attributes.R
inst/examples/ex-ba_germplasmattributes_categories.R
inst/examples/ex-ba_germplasmattributes_details.R inst/examples/ex-ba_locations.R inst/examples/ex-ba_locations_details.R inst/examples/ex-ba_login.R inst/examples/ex-ba_logout.R inst/examples/ex-ba_markerprofiles_allelematrices_details.R inst/examples/ex-ba_markerprofiles_allelematrices_search.R inst/examples/ex-ba_markerprofiles_allelematrices_search_post.R inst/examples/ex-ba_markerprofiles_allelematrix_search.R inst/examples/ex-ba_markerprofiles_details.R inst/examples/ex-ba_markerprofiles_search.R inst/examples/ex-ba_markers_details.R inst/examples/ex-ba_markers_search.R inst/examples/ex-ba_markers_search_post.R inst/examples/ex-ba_observationvariables.R inst/examples/ex-ba_observationvariables_datatype.R inst/examples/ex-ba_observationvariables_details.R inst/examples/ex-ba_observationvariables_ontologies.R inst/examples/ex-ba_observationvariables_search_post.R inst/examples/ex-ba_phenotypes_search_post.R inst/examples/ex-ba_programs.R inst/examples/ex-ba_programs_search_post.R inst/examples/ex-ba_samples.R inst/examples/ex-ba_samples_save.R inst/examples/ex-ba_samples_search.R inst/examples/ex-ba_samples_search_post.R inst/examples/ex-ba_studies_details.R inst/examples/ex-ba_studies_germplasm_details.R inst/examples/ex-ba_studies_layout.R inst/examples/ex-ba_studies_observationlevels.R inst/examples/ex-ba_studies_observations.R inst/examples/ex-ba_studies_observationunits.R inst/examples/ex-ba_studies_observationunits_save.R inst/examples/ex-ba_studies_observationvariables.R inst/examples/ex-ba_studies_search_post.R inst/examples/ex-ba_studies_seasons.R inst/examples/ex-ba_studies_studytypes.R inst/examples/ex-ba_studies_table.R inst/examples/ex-ba_studies_table_save.R inst/examples/ex-ba_traits.R inst/examples/ex-ba_traits_details.R inst/examples/ex-ba_trials.R inst/examples/ex-ba_trials_details.R inst/examples/ex-ba_vendor_plates_details.R inst/examples/ex-ba_vendor_plates_search.R inst/examples/ex-ba_vendor_plates_search_post.R inst/examples/ex-ba_vendor_specifications.R inst/examples/ex-can_internet.R inst/examples/ex-check.R inst/examples/ex-genomemaps_details.R inst/examples/ex_calls.R inst/examples/ex_connect.R inst/notes/BrAPI_notes.md inst/notes/BrAPI_notes.pdf man/as.ba_db.Rd man/ba_calls.Rd man/ba_can_internet.Rd man/ba_check.Rd man/ba_commoncropnames.Rd man/ba_connect.Rd man/ba_crops.Rd man/ba_db.Rd man/ba_genomemaps.Rd man/ba_genomemaps_data.Rd man/ba_genomemaps_data_range.Rd man/ba_genomemaps_details.Rd man/ba_germplasm_attributes.Rd man/ba_germplasm_breedingmethods.Rd man/ba_germplasm_breedingmethods_details.Rd man/ba_germplasm_details.Rd man/ba_germplasm_details_study.Rd man/ba_germplasm_markerprofiles.Rd man/ba_germplasm_pedigree.Rd man/ba_germplasm_progeny.Rd man/ba_germplasm_search.Rd man/ba_germplasm_search_post.Rd man/ba_germplasmattributes_attributes.Rd man/ba_germplasmattributes_categories.Rd man/ba_germplasmattributes_details.Rd man/ba_locations.Rd man/ba_locations_details.Rd man/ba_login.Rd man/ba_logout.Rd man/ba_markerprofiles_allelematrices_details.Rd man/ba_markerprofiles_allelematrices_search.Rd man/ba_markerprofiles_allelematrices_search_post.Rd man/ba_markerprofiles_allelematrix_search.Rd man/ba_markerprofiles_details.Rd man/ba_markerprofiles_search.Rd man/ba_markers_details.Rd man/ba_markers_search.Rd man/ba_markers_search_post.Rd man/ba_observationvariables.Rd man/ba_observationvariables_datatypes.Rd man/ba_observationvariables_details.Rd man/ba_observationvariables_ontologies.Rd man/ba_observationvariables_search_post.Rd man/ba_phenotypes_search.Rd man/ba_phenotypes_search_post.Rd man/ba_programs.Rd man/ba_programs_search_post.Rd man/ba_samples.Rd man/ba_samples_save.Rd man/ba_samples_search.Rd man/ba_samples_search_post.Rd man/ba_show_expiration.Rd man/ba_show_info.Rd man/ba_studies_details.Rd man/ba_studies_germplasm_details.Rd man/ba_studies_layout.Rd man/ba_studies_observationlevels.Rd man/ba_studies_observations.Rd man/ba_studies_observationunits.Rd man/ba_studies_observationunits_save.Rd man/ba_studies_observationvariables.Rd man/ba_studies_search.Rd man/ba_studies_search_post.Rd man/ba_studies_seasons.Rd man/ba_studies_studytypes.Rd man/ba_studies_table.Rd man/ba_studies_table_save.Rd man/ba_traits.Rd man/ba_traits_details.Rd man/ba_trials.Rd man/ba_trials_details.Rd man/ba_vendor_plates_details.Rd man/ba_vendor_plates_search.Rd man/ba_vendor_plates_search_post.Rd man/ba_vendor_specifications.Rd man/brapi-deprecated.Rd man/brapi-package.Rd man/is.ba_con.Rd man/print.ba_con.Rd man/print.ba_db_list.Rd man/skip_if_local.Rd tests/genesys/test_gs_germplasm_details.R tests/internet/test_ba_check.R tests/internet/test_ba_connect.R tests/sweetpotatobase/test_sp_breedingmethods.R tests/sweetpotatobase/test_sp_breedingmethods_details.R tests/sweetpotatobase/test_sp_calls.R tests/sweetpotatobase/test_sp_commoncropnames.R tests/sweetpotatobase/test_sp_crops.R tests/sweetpotatobase/test_sp_genomemaps.R tests/sweetpotatobase/test_sp_genomemaps_data.R tests/sweetpotatobase/test_sp_genomemaps_data_range.R tests/sweetpotatobase/test_sp_genomemaps_details.R tests/sweetpotatobase/test_sp_germplasm_attributes.R tests/sweetpotatobase/test_sp_germplasm_details.R tests/sweetpotatobase/test_sp_germplasm_details_study.R tests/sweetpotatobase/test_sp_germplasm_markerprofiles.R tests/sweetpotatobase/test_sp_germplasm_pedigree.R tests/sweetpotatobase/test_sp_germplasm_progeny.R tests/sweetpotatobase/test_sp_germplasm_search.R tests/sweetpotatobase/test_sp_germplasm_search_post.R tests/sweetpotatobase/test_sp_germplasmattributes.R tests/sweetpotatobase/test_sp_germplasmattributes_categories.R tests/sweetpotatobase/test_sp_locations.R tests/sweetpotatobase/test_sp_locations_details.R tests/sweetpotatobase/test_sp_markerprofiles_allelematrices_search.R tests/sweetpotatobase/test_sp_markerprofiles_allelematrices_search_post.R tests/sweetpotatobase/test_sp_markerprofiles_allelematrix_search.R tests/sweetpotatobase/test_sp_markerprofiles_details.R tests/sweetpotatobase/test_sp_markerprofiles_search.R tests/sweetpotatobase/test_sp_markers_details.R tests/sweetpotatobase/test_sp_markers_search.R tests/sweetpotatobase/test_sp_markers_search_post.R tests/sweetpotatobase/test_sp_observationvariable_datatypes.R tests/sweetpotatobase/test_sp_observationvariables.R tests/sweetpotatobase/test_sp_observationvariables_details.R tests/sweetpotatobase/test_sp_observationvariables_ontologies.R tests/sweetpotatobase/test_sp_observationvariables_search_post.R tests/sweetpotatobase/test_sp_phenotypes_search_post.R tests/sweetpotatobase/test_sp_programs.R tests/sweetpotatobase/test_sp_programs_search_post.R tests/sweetpotatobase/test_sp_samples.R tests/sweetpotatobase/test_sp_studies_details.R tests/sweetpotatobase/test_sp_studies_layout.R tests/sweetpotatobase/test_sp_studies_observationlevels.R tests/sweetpotatobase/test_sp_studies_observations.R tests/sweetpotatobase/test_sp_studies_observationunits.R tests/sweetpotatobase/test_sp_studies_observationunits_save.R tests/sweetpotatobase/test_sp_studies_observationvariables.R tests/sweetpotatobase/test_sp_studies_search.R tests/sweetpotatobase/test_sp_studies_seasons.R tests/sweetpotatobase/test_sp_studies_studytypes.R tests/sweetpotatobase/test_sp_studies_table.R tests/sweetpotatobase/test_sp_traits.R tests/sweetpotatobase/test_sp_traits_details.R tests/sweetpotatobase/test_sp_trials.R tests/sweetpotatobase/test_sp_trials_details.R tests/testserver/test_ts_breedingmethods.R tests/testserver/test_ts_breedingmethods_details.R tests/testserver/test_ts_calls.R tests/testserver/test_ts_commoncropnames.R tests/testserver/test_ts_crops.R tests/testserver/test_ts_genomemaps.R tests/testserver/test_ts_genomemaps_data.R tests/testserver/test_ts_genomemaps_data_range.R tests/testserver/test_ts_genomemaps_details.R tests/testserver/test_ts_germplasm_attributes.R tests/testserver/test_ts_germplasm_details.R tests/testserver/test_ts_germplasm_details_study.R tests/testserver/test_ts_germplasm_markerprofiles.R tests/testserver/test_ts_germplasm_pedigree.R tests/testserver/test_ts_germplasm_progeny.R tests/testserver/test_ts_germplasm_search.R tests/testserver/test_ts_germplasm_search_post.R tests/testserver/test_ts_germplasmattributes.R tests/testserver/test_ts_germplasmattributes_categories.R tests/testserver/test_ts_locations.R tests/testserver/test_ts_locations_details.R tests/testserver/test_ts_markerprofiles_allelematrices_search.R tests/testserver/test_ts_markerprofiles_allelematrices_search_post.R tests/testserver/test_ts_markerprofiles_allelematrix_details.R tests/testserver/test_ts_markerprofiles_allelematrix_search.R tests/testserver/test_ts_markerprofiles_details.R tests/testserver/test_ts_markerprofiles_search.R tests/testserver/test_ts_markers_details.R tests/testserver/test_ts_markers_search.R tests/testserver/test_ts_markers_search_post.R tests/testserver/test_ts_observationvariable_datatypes.R tests/testserver/test_ts_observationvariables.R tests/testserver/test_ts_observationvariables_details.R tests/testserver/test_ts_observationvariables_ontologies.R tests/testserver/test_ts_observationvariables_search_post.R tests/testserver/test_ts_phenotypes_search_post.R tests/testserver/test_ts_programs.R tests/testserver/test_ts_programs_search_post.R tests/testserver/test_ts_samples.R tests/testserver/test_ts_samples_search.R tests/testserver/test_ts_samples_search_post.R tests/testserver/test_ts_studies_details.R tests/testserver/test_ts_studies_germplasm_details.R tests/testserver/test_ts_studies_layout.R tests/testserver/test_ts_studies_observationlevels.R tests/testserver/test_ts_studies_observations.R tests/testserver/test_ts_studies_observationunits.R tests/testserver/test_ts_studies_observationunits_save.R tests/testserver/test_ts_studies_observationvariables.R tests/testserver/test_ts_studies_search.R tests/testserver/test_ts_studies_search_post.R tests/testserver/test_ts_studies_seasons.R tests/testserver/test_ts_studies_studytypes.R tests/testserver/test_ts_studies_table.R tests/testserver/test_ts_traits.R tests/testserver/test_ts_traits_details.R tests/testserver/test_ts_trials.R tests/testserver/test_ts_trials_details.R tests/testserver/test_ts_vendor_plates_details.R tests/testserver/test_ts_vendor_plates_search.R tests/testserver/test_ts_vendor_plates_search_post.R tests/testserver/test_ts_vendor_specifications.R tests/testthat.R tests/testthat/test_ba_check_ba.R tests/testthat/test_ba_check_paging.R tests/testthat/test_ba_db.R tests/testthat/test_ba_get_brapi.R tests/testthat/test_ba_loc2tbl.R tests/testthat/test_ba_message.R tests/testthat/test_ba_print_methods.R tests/testthat/test_ba_rclass.R tests/testthat/test_ba_show_expiration.R tests/testthat/test_ba_show_info.R tests/testthat/test_ba_status_ok.R tests/testthat/test_ba_std2tbl.R tests/testthat/test_check_character.R tests/testthat/test_check_deprecated.R tests/testthat/test_check_paging.R tests/testthat/test_dbs.R tests/testthat/test_get_body.R tests/testthat/test_get_endpoint.R tests/testthat/test_match_req.R
vignettes/.gitignore
vignettes/tutorial.R vignettes/tutorial.Rmd
vignettes/tutorial.html
c5sire/brapi documentation built on June 4, 2019, 12:48 p.m.