kmr_write_rds: kmr_write_rds
In c5sire/kmerize: K-Mer Tools for Building Databases

Description Usage Arguments Value See Also Examples

Write kmer database as rds format.

1	kmr_write_rds(db, to = db)

`db`	Name of kmer database
`to`	Name of target file (default same as db name)

logical

Other kmer_core: kmr_count(), kmr_install_kmc(), kmr_read_parquet(), kmr_read_rds(), kmr_read_tab(), kmr_write_parquet(), kmr_write_tab()

if (interactive()) {

  fa <- system.file("testdata/phix174_m-pe_w_err_5k_30q.fastq.gz",
  package = "kmerize")

  out_file <- file.path(tempdir(), "phx")
  k <- 7
  kmr_count(fa, out_file, k = k, f = "q")
  
  kmr_write_rds(out_file)

  dat <- kmr_read_rds(out_file)
  head(dat)

}