integration_matrices: Example of imported multi-quantification integration...
In calabrialab/ISAnalytics: Analyze gene therapy vector insertion sites data identified from genomics next generation sequencing reads for clonal tracking studies
integration_matrices R Documentation
Example of imported multi-quantification integration matrices.
Description
The data was obtained manually by simulating real research
data.
Usage
data("integration_matrices")
Format
Data frame with 1689 rows and 8 columns
- chr
The chromosome number (as character)
- integration_locus
Number of the base at
which the viral insertion occurred
- strand
Strand of the integration
- GeneName
Symbol of the closest gene
- GeneStrand
Strand of the closest gene
- CompleteAmplificationID
Unique sample identifier
- seqCount
Value of the sequence count quantification
- fragmentEstimate
Value of the fragment estimate quantification
calabrialab/ISAnalytics documentation built on Nov. 2, 2023, 8:57 p.m.
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| integration_matrices | R Documentation |
Example of imported multi-quantification integration matrices.
Description
The data was obtained manually by simulating real research data.
Usage
data("integration_matrices")
Format
Data frame with 1689 rows and 8 columns
- chr
The chromosome number (as character)
- integration_locus
Number of the base at which the viral insertion occurred
- strand
Strand of the integration
- GeneName
Symbol of the closest gene
- GeneStrand
Strand of the closest gene
- CompleteAmplificationID
Unique sample identifier
- seqCount
Value of the sequence count quantification
- fragmentEstimate
Value of the fragment estimate quantification
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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