compare_count_matrix_to_library: Compare count matrix to LibraryAnnotation.

In cancerit/RCRISPR: R Functions for CRISPR-Related Analyses

Compare count matrix to LibraryAnnotation.

Description

Compares guide identifier and gene symbols in count matrix and LibraryAnnotation objects.

Usage

compare_count_matrix_to_library(
  count_matrix = NULL,
  id_column = 1,
  gene_column = 2,
  library_annotation_object = NULL
)

Arguments

count_matrix	data frame of sample counts.
id_column	the index of column containing unique sgRNA identifiers.
gene_column	the index of column containing gene symbols.
library_annotation_object	LibraryAnnotations object

Value

logical.

See Also

LibraryAnnotations-class

cancerit/RCRISPR documentation built on April 26, 2023, 10:12 p.m.