compare_matrix_to_sample_metadata: Compare matrix to SampleMetadata.

In cancerit/RCRISPR: R Functions for CRISPR-Related Analyses

Compare matrix to SampleMetadata.

Description

Checks sample names in matrix are present in SampleMetadata object.

Usage

compare_matrix_to_sample_metadata(
  data = NULL,
  id_column = 1,
  gene_column = NULL,
  sample_columns = 3,
  sample_metadata_object = NULL
)

Arguments

data	data frame of sample counts or log fold changes.
id_column	the index of column containing unique sgRNA identifiers.
gene_column	the index of column containing gene symbols.
sample_columns	indices of columns containing counts.
sample_metadata_object	SampleMetadata object

Value

logical.

See Also

SampleMetadata-class

cancerit/RCRISPR documentation built on April 26, 2023, 10:12 p.m.