convert_sample_counts_objects_to_count_matrix: Convert SampleCounts objects into count matrix.

In cancerit/RCRISPR: R Functions for CRISPR-Related Analyses

Convert SampleCounts objects into count matrix.

Description

Convert a list of processed and validated sample counts into a count matrix.

Usage

convert_sample_counts_objects_to_count_matrix(
  sample_counts = NULL,
  sort_ids = FALSE
)

Arguments

sample_counts	List of SampleCounts objects
sort_ids	whether to order by gene and sgRNA identifier (FALSE)

Details

Takes a list of SampleCount objects, extracts processed counts with pre-defined column names and combines them into a data frame, also known as a count matrix.

Value

a data frame containing sample counts.

See Also

SampleCounts-class

cancerit/RCRISPR documentation built on April 26, 2023, 10:12 p.m.