Files in cancerpolicy/bcimodel
Model the impact of early detection and treatment interventions for breast cancer

.gitignore
DESCRIPTION
NAMESPACE
R/cantrance.R R/databases.R R/earlydetect.R R/general.R R/initialize.R R/outcomes.R R/parallelized.R R/screentreat_library.R R/simpolicies.R R/systime.R R/treatment.R README.md
analyses/advanced/function_map.docx
analyses/eastafrica-colombia/baseline_from_treated_survival.Rmd
analyses/eastafrica-colombia/baseline_from_treated_survival.html
analyses/eastafrica-colombia/for_comparing_replicability/colombia_100sims.csv
analyses/eastafrica-colombia/for_comparing_replicability/colombia_100sims_compare.csv
analyses/eastafrica-colombia/for_comparing_replicability/colombia_100sims_compare.xls
analyses/eastafrica-colombia/for_comparing_replicability/eastafrica-colombia.Rmd
analyses/eastafrica-colombia/for_comparing_replicability/eastafrica-colombia.docx
analyses/eastafrica-colombia/for_comparing_replicability/eastafrica_100sims.csv
analyses/eastafrica-colombia/main_results/compare_main_100v50.csv
analyses/eastafrica-colombia/main_results/compare_main_100v50.xlsx
analyses/eastafrica-colombia/main_results/compare_main_100vs50.Rmd
analyses/eastafrica-colombia/main_results/main_100sims/colombia_100sims.csv
analyses/eastafrica-colombia/main_results/main_100sims/eastafrica-colombia.Rmd
analyses/eastafrica-colombia/main_results/main_100sims/eastafrica-colombia.docx
analyses/eastafrica-colombia/main_results/main_100sims/eastafrica-colombia_formatted.docx
analyses/eastafrica-colombia/main_results/main_100sims/eastafrica_100sims.csv
analyses/eastafrica-colombia/main_results/main_50sims/colombia_50sims.csv
analyses/eastafrica-colombia/main_results/main_50sims/eastafrica-colombia.Rmd
analyses/eastafrica-colombia/main_results/main_50sims/eastafrica-colombia.docx
analyses/eastafrica-colombia/main_results/main_50sims/eastafrica_50sims.csv
analyses/profiling/profiling.Rmd
analyses/profiling/profiling.nb.html
analyses/profiling/runtime_analysis.docx
analyses/validation/compare_USincidence.Rmd
analyses/validation/compare_USincidence.html
analyses/validation/validation.Rmd
analyses/validation/validation.html
analyses/validation/validation_100sims.csv
analyses/validation/validation_withtrend_100sims.csv
bcimodel.Rproj
data-raw/agestructure.R data-raw/example.R data-raw/incidence.R data-raw/incidence_preprocess.R data-raw/lifetable.R
data/agestructure.rda
data/allmortratesf.rda
data/cohortltf.rda
data/ex1.rda
data/incratesf.rda
inst/doc/introduction.R inst/doc/introduction.Rmd
inst/doc/introduction.html
inst/extdata/agestructure/std_age.csv
inst/extdata/agestructure/tza_age.csv
inst/extdata/incidence/18000299_uga.csv
inst/extdata/incidence/CI5-Xd/14540199_mal.csv
inst/extdata/incidence/CI5-Xd/17100199_saf.csv
inst/extdata/incidence/CI5-Xd/17160270_zim.csv
inst/extdata/incidence/CI5-Xd/17880299_tun.csv
inst/extdata/incidence/CI5-Xd/18000299_uga.csv
inst/extdata/incidence/CI5-Xd/20320199_arg1.csv
inst/extdata/incidence/CI5-Xd/20320699_arg2.csv
inst/extdata/incidence/CI5-Xd/20320799_arg3.csv
inst/extdata/incidence/CI5-Xd/20320899_arg4.csv
inst/extdata/incidence/CI5-Xd/20760199_bra1.csv
inst/extdata/incidence/CI5-Xd/20760299_bra2.csv
inst/extdata/incidence/CI5-Xd/20760899_bra3.csv
inst/extdata/incidence/CI5-Xd/20761099_bra4.csv
inst/extdata/incidence/CI5-Xd/20761199_bra5.csv
inst/extdata/incidence/CI5-Xd/20761899_bra6.csv
inst/extdata/incidence/CI5-Xd/21520199_chi1.csv
inst/extdata/incidence/CI5-Xd/21520299_chi2.csv
inst/extdata/incidence/CI5-Xd/21520399_chi3.csv
inst/extdata/incidence/CI5-Xd/21700199_col1.csv
inst/extdata/incidence/CI5-Xd/21700299_col2.csv
inst/extdata/incidence/CI5-Xd/21700399_col3.csv
inst/extdata/incidence/CI5-Xd/21700499_col4.csv
inst/extdata/incidence/CI5-Xd/21880099_cor.csv
inst/extdata/incidence/CI5-Xd/21920199_cub.csv
inst/extdata/incidence/CI5-Xd/22180199_ecu1.csv
inst/extdata/incidence/CI5-Xd/22180299_ecu2.csv
inst/extdata/incidence/CI5-Xd/README.txt
inst/extdata/incidence/CI5-Xd/cancer.txt
inst/extdata/incidence/CI5-Xd/files_to_select.csv
inst/extdata/incidence/CI5-Xd/files_to_select.xlsx
inst/extdata/incidence/CI5-Xd/layout.txt
inst/extdata/incidence/CI5-Xd/registry.txt
inst/extdata/incidence/SEER/bc_1975-1979_incidence.csv
inst/extdata/mortality/IHME_lifet/README.txt
inst/extdata/mortality/IHME_lifet/lifetable_IHME_GBD_2013_LIFE_TABLE_1990_2013_Y2014M12D17.zip
man/add_features.Rd man/allmortrates.Rd man/bcirates.Rd man/build_simpop.Rd man/calc_ac_lifespan.Rd man/calc_ac_lifespan_pop.Rd man/calcarr.Rd man/calcmrr.Rd man/compile_long.Rd man/compile_naturalhist.Rd man/create_stageshift_map.Rd man/cuminc.Rd man/cummort.Rd man/cumsurv_to_exprate.Rd man/cumyears.Rd man/format_age.Rd man/format_bounds.Rd man/format_bounds_list.Rd man/initialize_pop.Rd man/interpolate_cumsurv.Rd man/paradd_features.Rd man/parinitialize_pop.Rd man/parsim_multinom.Rd man/parsim_treatment_by_subgroup.Rd man/parsimpolicies.Rd man/partreatments_by_policy.Rd man/plot_rates.Rd man/plot_results.Rd man/rate_to_cumsurv.Rd man/return_value_from_id.Rd man/returnstat4matrix.Rd man/rexp_matrix.Rd man/running_product.Rd man/shift_stages.Rd man/shifttreatment_indicator.Rd man/sim_KM.Rd man/sim_clinical_incidence.Rd man/sim_multinom.Rd man/sim_treatment_by_subgroup.Rd man/simpolicies.Rd man/stageshift_indicator.Rd man/timetocancerdeath_by_policy.Rd man/treatments_by_policy.Rd man/update_time_stageshift.Rd man/update_treat_stageshift.Rd tests/testthat.R tests/testthat/test_databases.R tests/testthat/test_earlydetect.R tests/testthat/test_general.R tests/testthat/test_initialize.R tests/testthat/test_outcomes.R tests/testthat/test_parallel.R tests/testthat/test_treatment.R vignettes/introduction.Rmd
cancerpolicy/bcimodel documentation built on Feb. 13, 2018, 2:06 p.m.