plotDrugSets: Produces a barplot of the average values for a set of NSCs...

In cannin/rcellminer: rcellminer: Molecular Profiles, Drug Response, and Chemical Structures for the NCI-60 Cell Lines

Description

Produces a barplot of the average values for a set of NSCs with a error bar (one standard deviation)

Usage

plotDrugSets(
  drugAct,
  drugs,
  mainLabel = "",
  pdfFilename = NULL,
  statistic = "mean"
)

Arguments

drugAct	a matrix of drug activity values (cell lines as columns, drug entries as rows)
drugs	a vector of NSC IDs whose values will be averaged by cell line
mainLabel	a main label for the plot
pdfFilename	a string file name for a PDF plot, no file output will be produced if this is not provided
statistic	a string, either 'mean' or 'median' (Default: mean)

Value

no values are returned

Examples

drugAct <- exprs(getAct(rcellminerData::drugData))
drugs <- rownames(drugAct)[1:8]
plotDrugSets(drugAct, drugs, "Test")

cannin/rcellminer documentation built on Aug. 3, 2021, 8:51 p.m.