CCF: Extract CCF estimates.
In caravagnalab/CNAqc: CNAqc - Copy Number Analysis quality check
CCF R Documentation
Extract CCF estimates.
Description
This function extracts Cancer Cell Fractions (CCFs) estimates
from a CNAqc object, after they have been computed using
function 'compute_CCF'. The estimates are pooled
across the used karyotypes, and extracted from the
'CCF_estimates' field of the input object.
Usage
CCF(x)
Arguments
x
A CNAqc object.
Value
A mutations tibble with columns for mutation multiplicity and CCFs.
Examples
data("example_PCAWG", package = 'CNAqc')
CCF(example_PCAWG)
caravagnalab/CNAqc documentation built on Oct. 31, 2024, 3:54 a.m.
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| CCF | R Documentation |
Extract CCF estimates.
Description
This function extracts Cancer Cell Fractions (CCFs) estimates from a CNAqc object, after they have been computed using function 'compute_CCF'. The estimates are pooled across the used karyotypes, and extracted from the 'CCF_estimates' field of the input object.
Usage
CCF(x)
Arguments
x |
A CNAqc object. |
Value
A mutations tibble with columns for mutation multiplicity and CCFs.
Examples
data("example_PCAWG", package = 'CNAqc')
CCF(example_PCAWG)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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