Mutations: Extract mutations.
In caravagnalab/CNAqc: CNAqc - Copy Number Analysis quality check
Mutations R Documentation
Extract mutations.
Description
Getter to obtain mutation calls from an object.
Usage
Mutations(x, cna = c("clonal", "subclonal"), type = c("SNV", "indel"))
Arguments
x
A CNAqc object.
cna
"clonal" for clonal CNAs, "subclonal" for subclonal CNAs.
type
"SNV" for single-nucleotide variants, "indel" for insertion-deletions.
Value
A tibble with the data.
Examples
data("example_PCAWG", package = 'CNAqc')
Mutations(example_PCAWG)
caravagnalab/CNAqc documentation built on Oct. 31, 2024, 3:54 a.m.
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| Mutations | R Documentation |
Extract mutations.
Description
Getter to obtain mutation calls from an object.
Usage
Mutations(x, cna = c("clonal", "subclonal"), type = c("SNV", "indel"))
Arguments
x |
A CNAqc object. |
cna |
|
type |
|
Value
A tibble with the data.
Examples
data("example_PCAWG", package = 'CNAqc')
Mutations(example_PCAWG)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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