replaceSNP: Replace SNPs with IUPAC ambiguities
In carlopacioni/amplicR: An R package to process amplicon data
View source: R/helper.functions.R
replaceSNP R Documentation
Replace SNPs with IUPAC ambiguities
Description
Replace SNPs with IUPAC ambiguities
Usage
replaceSNP(genotypes, seqAlleles, SNPpositions)
Arguments
genotypes
(named integer) The genotypes (0,1,2) named with SNPs (see
Details)
seqAlleles
possible sequences of the alleles or baseAllele (see make.alleles for details)
SNPpositions
(integer) The position where the SNPs occur
Details
See make.alleles for details on how genotypes should be formatted
carlopacioni/amplicR documentation built on Aug. 19, 2023, 7:59 p.m.
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View source: R/helper.functions.R
| replaceSNP | R Documentation |
Replace SNPs with IUPAC ambiguities
Description
Replace SNPs with IUPAC ambiguities
Usage
replaceSNP(genotypes, seqAlleles, SNPpositions)
Arguments
genotypes |
(named integer) The genotypes (0,1,2) named with SNPs (see Details) |
seqAlleles |
possible sequences of the alleles or baseAllele (see |
SNPpositions |
(integer) The position where the SNPs occur |
Details
See make.alleles for details on how genotypes should be formatted
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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