plot_convergence: Plot AutoSpill convergence
In carlosproca/autospill: AutoSpill: A method for calculating spillover coefficients to compensate or unmix high-parameter flow cytometry data
Description
Usage
Arguments
Value
References
See Also
View source: R/plot_convergence.r
Description
Plots convergence of iterative refinement of the spillover matrix.
Usage
1
plot_convergence(convergence.log, popnegpop.slope, asp)
Arguments
convergence.log
Dataframe with convergence data of AutoSpill.
popnegpop.slope
Matrix with slope errors resulting from calculating
spillover with positive and negative populations. Optional parameter, it
can be NULL.
asp
List with AutoSpill parameters.
Value
NULL.
References
Roca et al:
AutoSpill: A method for calculating spillover coefficients to compensate
or unmix high-parameter flow cytometry data.
bioRxiv 2020.06.29.177196;
doi:10.1101/2020.06.29.177196
(2020).
See Also
refine.spillover, process.posnegpop,
and get.autospill.param.
carlosproca/autospill documentation built on Dec. 19, 2021, 1:52 p.m.
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Description Usage Arguments Value References See Also
View source: R/plot_convergence.r
Description
Plots convergence of iterative refinement of the spillover matrix.
Usage
1 | plot_convergence(convergence.log, popnegpop.slope, asp)
|
Arguments
convergence.log |
Dataframe with convergence data of AutoSpill. |
popnegpop.slope |
Matrix with slope errors resulting from calculating
spillover with positive and negative populations. Optional parameter, it
can be |
asp |
List with AutoSpill parameters. |
Value
NULL.
References
Roca et al: AutoSpill: A method for calculating spillover coefficients to compensate or unmix high-parameter flow cytometry data. bioRxiv 2020.06.29.177196; doi:10.1101/2020.06.29.177196 (2020).
See Also
refine.spillover, process.posnegpop,
and get.autospill.param.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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