read.marker: Read markers in a set of flow controls
In carlosproca/autospill: AutoSpill: A method for calculating spillover coefficients to compensate or unmix high-parameter flow cytometry data
Description
Usage
Arguments
Value
References
See Also
Description
Returns a dataframe and writes a csv file with the common set of markers in
a set of single-color controls, together with corrected names in case of
presence of forbidden characters.
Usage
1
read.marker(control.dir, control.def.file, asp)
Arguments
control.dir
Character string with the directory with the set of
single-color controls.
control.def.file
Character string with the CSV file defining the
names and channels of the single-color controls.
asp
List with AutoSpill parameters.
Value
Dataframe with the original and corrected names of markers.
References
Roca et al:
AutoSpill: A method for calculating spillover coefficients to compensate
or unmix high-parameter flow cytometry data.
bioRxiv 2020.06.29.177196;
doi:10.1101/2020.06.29.177196
(2020).
See Also
carlosproca/autospill documentation built on Dec. 19, 2021, 1:52 p.m.
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Description Usage Arguments Value References See Also
Description
Returns a dataframe and writes a csv file with the common set of markers in a set of single-color controls, together with corrected names in case of presence of forbidden characters.
Usage
1 | read.marker(control.dir, control.def.file, asp)
|
Arguments
control.dir |
Character string with the directory with the set of single-color controls. |
control.def.file |
Character string with the CSV file defining the names and channels of the single-color controls. |
asp |
List with AutoSpill parameters. |
Value
Dataframe with the original and corrected names of markers.
References
Roca et al: AutoSpill: A method for calculating spillover coefficients to compensate or unmix high-parameter flow cytometry data. bioRxiv 2020.06.29.177196; doi:10.1101/2020.06.29.177196 (2020).
See Also
R Package Documentation
Browse R Packages
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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