Description Usage Arguments Value
Plot snps with gene annotations
1 2 3 |
file |
Name of pdf output file. |
x, y |
x and y coordinates of points to plot. |
start, end |
x coordinates of start and end positions of regions. |
label |
Labels for regions. |
width |
Width in inches of pdf output. |
ymax |
Value to replace infinite y-coordinates with. |
transform |
Function to be applied to y-coordinates before plotting. |
col |
Color for points (defaults to black). |
main |
String used as plot title. |
upper_hook |
Function that will be called right after the upper part of the plot is created. Its arguments correspond to ‘x’, ‘y’, ‘start’, ‘end’, and ‘label’. |
lower_hook |
Same as ‘upper_hook’ except that the function is called right after the lower part of the plot is created. |
point_cex |
Factor by which points in plot are magnified. |
pch |
Character/symbol used for points (see |
None.
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