getCelllines: Retrieve cell lines for corresponding cancer type
In cbg-ethz/slidr: Discovery of mutation-specific synthetic lethal partners from large pan-cancer perturbation screens
View source: R/data_process_funcs.R
getCelllines R Documentation
Retrieve cell lines for corresponding cancer type
Description
The function takes in the annotation file, meta data and the cancer type and returns
a set of all cell lines for that cancer type.
Usage
getCelllines(x, cellline_annot, meta_data)
Arguments
x
primary site
cellline_annot
cell line annotation data frame
meta_data
information on different sub types for each primary site
Value
A vector of cell lines for each cancer type
cbg-ethz/slidr documentation built on Feb. 8, 2023, 11:15 p.m.
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View source: R/data_process_funcs.R
| getCelllines | R Documentation |
Retrieve cell lines for corresponding cancer type
Description
The function takes in the annotation file, meta data and the cancer type and returns a set of all cell lines for that cancer type.
Usage
getCelllines(x, cellline_annot, meta_data)
Arguments
x |
primary site |
cellline_annot |
cell line annotation data frame |
meta_data |
information on different sub types for each primary site |
Value
A vector of cell lines for each cancer type
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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