plotSLBoxplot: Function to plot annotated box-plots of SL pairs for a given...
In cbg-ethz/slidr: Discovery of mutation-specific synthetic lethal partners from large pan-cancer perturbation screens
plotSLBoxplot R Documentation
Function to plot annotated box-plots of SL pairs for a given cancer type
Description
Function to plot annotated box-plots of SL pairs for a given cancer type
Usage
plotSLBoxplot(canc_data, hits_df, path_results, WT_pval_thresh = 0.1)
Arguments
canc_data
Processed data object for a given cancer type
hits_df
dataframe of SL pairs with their p-values returned by 'identifySLHits' function
path_results
The path to where the results should be stored
WT_pval_thresh
Discard SL pairs with WT p-values less than this threshold. Default = 0.1
cbg-ethz/slidr documentation built on Feb. 8, 2023, 11:15 p.m.
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| plotSLBoxplot | R Documentation |
Function to plot annotated box-plots of SL pairs for a given cancer type
Description
Function to plot annotated box-plots of SL pairs for a given cancer type
Usage
plotSLBoxplot(canc_data, hits_df, path_results, WT_pval_thresh = 0.1)
Arguments
canc_data |
Processed data object for a given cancer type |
hits_df |
dataframe of SL pairs with their p-values returned by 'identifySLHits' function |
path_results |
The path to where the results should be stored |
WT_pval_thresh |
Discard SL pairs with WT p-values less than this threshold. Default = 0.1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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