Man pages for cdeterman/OmicsMarkeR
Classification and Feature Selection for 'Omics' Datasets

aggregationFeature Aggregation
bagging.wrapperBagging Wrapper for Ensemble Features Selection
canberraCanberra Distance
canberra_stabilityCanberra Stability
CLAComplete Linear Aggregation
create.corr.matrixCorrelated Multivariate Data Generator
create.discr.matrixDiscriminatory Multivariate Data Generator
create.random.matrixRandom Multivariate Data Generator
denovo.gridDenovo Grid Generation
EEEnsemble Exponential Aggregation
EMEnsemble Mean Aggregation
ESEnsemble Stability Aggregation
extract.argsArgument extractor
extract.featuresFeature Extraction
feature.tableFeature Consistency Table
fit.only.modelFit Models without Feature Selection
fs.ensembl.stabilityEnsemble Classification & Feature Selection
fs.stabilityClassification & Feature Selection
jaccardJaccard Index
kunchevaKuncheva's Index
modelListModel List
modelTunerModel Tuner
modelTuner_looModel Tuner for Leave-One-Out Cross-Validation
noise.matrixNoise Matrix Generator
ochiaiOchiai's Index
optimize.modelModel Optimization and Metrics
pairwise.model.stabilityPairwise Model Stability Metrics
pairwise.stabilityPairwise Stability Metrics
paramsModel Parameters and Properties
perf.calcPerformance Statistics Calculations
performance.metricsPerformance Metrics of fs.stability or fs.ensembl.stability...
performance.statsPerformance Statistics (Internal for 'perf.calc')
perm.classMonte Carlo Permutation of Model Performance
perm.featuresFeature Selection via Monte Carlo Permutation
pofPercentage of Overlapping Features
predictingModel Group Prediction
prediction.metricsPrediction Metric Calculations
predictNewClassesClass Prediction
RPTRobustness-Performance Trade-Off
sequesterSequester Additional Parameters
sorensenDice-Sorensen's Index
spearmanSpearman Rank Correlation Coefficient
svmrfeFeatureRankingSVM Recursive Feature Extraction (Binary)
svmrfeFeatureRankingForMulticlassSVM Recursive Feature Extraction (Multiclass)
svm.weightsSVM Multiclass Weights Ranking
trainingModel Training
tune.instructionsModel Optimization Instructions
cdeterman/OmicsMarkeR documentation built on May 12, 2017, 1:11 a.m.