Man pages for ceparman/Core5.3
Core API fucntions
| apiGET | apiGET - Do a get from the Core ODATA REST API. |
| apiPOST | apiPOST - Do a POST to the Core ODATA REST API. |
| apiPUT | apiPUT - Do a PUT to the Core ODATA REST API. |
| attachFile | attachFile - Attaches a file to an entity or file attribute. |
| attributeCleanName | attributeCleanName - converts names to uppercase and replaces... |
| authBasic | authBasic - Authenticates against the ODATA REST API using... |
| buildUrl | buildUrl - build URL for call to Core ODATA API. |
| coreAPI | coreAPI Creates a object of class coreAPI that contains user... |
| createEntity | createEntity - Create a new instance of a entity. Used for... |
| createExperiment | createExperiment - Create a new instance of an experiment. |
| createExperimentContainer | createExperimentContainer- Creates a new experiment container... |
| createExperimentSample | createExperimentSample - Create a new experiment sample from... |
| createSampleLot | createSampleLot - Creates a lot of a sample. |
| experimentPublish | experimentPublish Publishes an experiment. |
| experimentUnPublish | experimentUnPublish UnPublishes an experiment. |
| getAttachedFile | getAttachedFile - Gets file attached to an attribute on a... |
| getCellContents | getCellContents - Gets information about a single container... |
| getContainerCellIds | getContainerCellIds - Gets cell ids for a container |
| getContainerContents | getContainerContents - Gets information about container... |
| getEntityAssociations | 'getEntityAssociations' Get assoication for a context |
| getEntityByBarcode | getEntityByBarcode - Get an entity by barcode from the Core... |
| getEntityByName | getEntityByName - Get an entity by name from the Core LIMS... |
| getEntityLocation | getEntityLocation - Get location for an entity by barcode... |
| getEntityMetadata | getEntitMetadata - Get entity metadata. |
| getEntityProject | getEntityProject - Get project(s) for an entity by barcode... |
| getExperimentContainers | getExperimentContainers - Gets experiment containers from... |
| getExperimentSamples | getExperimentSamples - Gets experiment sample barcodes from... |
| getExperimentSamplesAssayData | getExperimentSamplesAssayData - Gets assay data for an... |
| getExperimentSamplesAssayFileData | getExperimentSamplesAssayFileData - Gets file attached as... |
| getExperimentSamplesIntermediateData | getExperimentSamplesIntermediateData - Gets intermediate data... |
| getExperimentSamplesRawData | getExperimentSamplesRawData - Gets raw data for an experiment... |
| getWellContents | getWellContents - Gets information about a single container... |
| logOut | logOut -Log user out of the LIMS. |
| ODATAcleanName | ODATAcleanName - converts names to ODATA compliant version.... |
| setCellContents | setCellContents - Puts a sample lot in a container Cell. |
| setExperimentSamplesAssayFileData | setExperimentSamplesAssayFileData - puts file attached as... |
| setWellContents | setWellContents - Puts a sample lot in a container well. |
| updateCellContents | updateCellContents - Updates amount and concentrations of... |
| updateEntityAssociations | 'updateEntityAssociations' Update entity assoications |
| updateEntityAttributes | 'updateEntityAttributes' Update entity assoications. |
| updateEntityLocation | 'updateEntityLocation'- Update entity location |
| updateEntityProject | 'updateEntityProject'- Update entity project association |
| updateExperimentSampleData | updateExperimentSampleData - Update experiment sample assay... |
| updateExperimentSampleRawData | updateExperimentSampleRawData - Update experiment sample raw... |
| updateMetadata | 'updateMetadata' g Updates cached metadata so metadata is up... |
